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Journal Articles

Difference in the hydration water mobility around F-actin and myosin subfragment-1 studied by quasielastic neutron scattering

Matsuo, Tatsuhito; Arata, Toshiaki*; Oda, Toshiro*; Nakajima, Kenji; Kawamura, Seiko; Kikuchi, Tatsuya; Fujiwara, Satoru

Biochemistry and Biophysics Reports (Internet), 6, p.220 - 225, 2016/07

Journal Articles

High resolution neutron protein crystallography, hydrogen and hydration in proteins

Niimura, Nobuo; Chatake, Toshiyuki; Ostermann, A.; Kurihara, Kazuo; Tanaka, Ichiro

Zeitschrift f$"u$r Kristallographie, 218(2), p.96 - 107, 2003/03

no abstracts in English

Journal Articles

Effect of hydration on the induction of strand breaks and base lesions in plasmid DNA films by $$gamma$$-radiation

Yokoya, Akinari; Cunniffe, S. M. T.*; O'Neill, P.*

Journal of the American Chemical Society, 124(30), p.8859 - 8866, 2002/07

 Times Cited Count:87 Percentile:87.69(Chemistry, Multidisciplinary)

no abstracts in English

Journal Articles

Formation of outer-and inner-sphere complexes of lanthanide elements at montmorillonite-water interface

Takahashi, Yoshio*; Tada, Akisa*; Kimura, Takaumi; Shimizu, Hiroshi*

Chemistry Letters, (6), p.700 - 701, 2000/06

no abstracts in English

Journal Articles

Hydrogen and hydration of protein

Niimura, Nobuo*; Minezaki, Yoshiaki

Nihon Kessho Gakkai-Shi, 40(1), p.114 - 118, 1998/00

no abstracts in English

Journal Articles

Neutron laue diffractometry with an imaging plate provides an effective data collection regime for neutron protein crystallography

Niimura, Nobuo; Minezaki, Yoshiaki; *; J.C.Castagna*; F.Cipriani*; P.Hoghoj*; M.S.Lehmann*; C.Wilkinson*

Nature Structural Biology, 4(11), p.909 - 914, 1997/11

 Times Cited Count:143 Percentile:94.91(Biochemistry & Molecular Biology)

no abstracts in English

Journal Articles

Neutron crystallography in biology

Niimura, Nobuo*

Tampakushitsu Kakusan Koso, 39(7), p.1283 - 1288, 1994/00

no abstracts in English

Oral presentation

Neutron scattering study on dynamics of hydration water around muscle contractile proteins

Matsuo, Tatsuhito; Arata, Toshiaki*; Oda, Toshiro*; Fujiwara, Satoru

no journal, , 

In this study, we investigated the dynamics of the hydration water around F-actin and myosin S1, which are proteins interacting with each other to produce force in muscle contraction, by quasielastic neutron scattering (QENS). The QENS measurements were conducted on the solution samples of F-actin (150 mg/ml) and S1 (80 mg/ml) in H$$_{2}$$O and D$$_{2}$$O using the cold-neutron disk-chopper spectrometer AMATERAS in MLF/J-PARC, Japan. The spectra of hydration water were obtained by subtracting those of proteins and those of bulk water from the measured spectra of H$$_{2}$$O samples (the spectra of proteins were obtained by subtracting those of D$$_{2}$$O buffer from those of D$$_{2}$$O samples, while the spectra of H$$_{2}$$O buffer was used as those of bulk water) with appropriate scaling factors. The translational diffusion coefficients(D$$_{T}$$) and the residence time ($$tau$$$$_{T}$$) were evaluated from the dependence of the half-widths at half-maximum of the Lorentzian functions fit to the spectra on the momentum transfer. In the current analysis, it was found that the D$$_{T}$$ value of the hydration water around S1was smaller than that of bulk water while the $$tau$$$$_{T}$$ value was larger than that of bulk water, suggesting that S1 has typical hydration water, the mobility of which is less than that of bulkwater. On the other hand, both the D$$_{T}$$ and the $$tau$$$$_{T}$$ values of the hydration water around F-actin were closer to those of bulk water, suggesting that the hydration water around F-actin has higher mobility than that around other proteins including S1. The results of a more detailed analysis will be given in the presentation.

Oral presentation

Dynamics of F-actin, myosin subfragment-1, and their hydration water studied by quasielastic neutron scattering

Matsuo, Tatsuhito; Arata, Toshiaki*; Oda, Toshiro*; Fujiwara, Satoru

no journal, , 

The dynamics of F-actin and myosin S1, and their hydration water were studied by quasielastic neutron scattering (QENS). Analysis of the spectra found that a larger fraction of the atoms of F-actin undergoes the motions with the smaller residence time than S1. It was also found that the mobility of the hydration water of S1 is lower than that of bulk water, while that of the hydration water of F-actin is slightly higher than that of bulk water, evaluated by their translational diffusion coefficient and the residence time. These results suggest that the concerted action of rapidly fluctuating F-actin and its hydration water allows F-actin to explore a wide range of the conformational space, which would facilitate the binding of myosin to F-actin.

Oral presentation

Dynamics of F-actin, myosin subfragment-1 (S1), and their hydration water studied by quasielastic neutron scattering

Matsuo, Tatsuhito; Arata, Toshiaki*; Oda, Toshiro*; Fujiwara, Satoru

no journal, , 

The picosecond dynamics of F-actin, myosin S1, and their hydration water were studied by quasielastic neutron scattering (QENS) at J-PARC. Analysis of the QENS spectra showed that a larger fraction of the atoms of F-actin undergoes the motions with the smaller residence time than S1. It was also found that the mobility of the hydration water of S1, which was evaluated from the translational diffusion coefficient, the residence time, and the rotational correlation time, is lower than that of bulk water, while that of the hydration water of F-actin is close to that of bulk water. These results suggest that the concerted action of rapidly fluctuating F-actin and its hydration water allows F-actin to explore a wide range of the conformational space, which would facilitate the binding of myosin to F-actin.

11 (Records 1-11 displayed on this page)
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